Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDNFP39905 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.1■□□□□ 0.17
GDNFP39905 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GDNFP39905 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GDNFP39905 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.1■□□□□ 0.17
GDNFP39905 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GDNFP39905 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.1■□□□□ 0.17
GDNFP39905 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GDNFP39905 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
GDNFP39905 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.1■□□□□ 0.17
GDNFP39905 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.1■□□□□ 0.17
GDNFP39905 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 AC069544.1-201ENST00000609399 999 ntBASIC16.1■□□□□ 0.17
GDNFP39905 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.1■□□□□ 0.17
GDNFP39905 AL645608.8-201ENST00000606034 2086 ntBASIC16.1■□□□□ 0.17
GDNFP39905 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
GDNFP39905 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
GDNFP39905 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
GDNFP39905 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.1■□□□□ 0.17
GDNFP39905 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GDNFP39905 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.1■□□□□ 0.17
GDNFP39905 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 KRT8P8-201ENST00000434750 1448 ntBASIC16.1■□□□□ 0.17
GDNFP39905 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.1■□□□□ 0.17
GDNFP39905 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.1■□□□□ 0.17
GDNFP39905 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GDNFP39905 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GDNFP39905 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GDNFP39905 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 AC080080.1-201ENST00000625121 2420 ntBASIC16.09■□□□□ 0.17
GDNFP39905 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.09■□□□□ 0.17
GDNFP39905 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.09■□□□□ 0.17
GDNFP39905 AC084018.2-201ENST00000613093 2607 ntBASIC16.09■□□□□ 0.17
GDNFP39905 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.09■□□□□ 0.17
GDNFP39905 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 TNRC18P3-201ENST00000441896 2691 ntBASIC16.09■□□□□ 0.17
GDNFP39905 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
GDNFP39905 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GDNFP39905 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.09■□□□□ 0.17
GDNFP39905 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.09■□□□□ 0.17
GDNFP39905 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.09■□□□□ 0.17
GDNFP39905 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.09■□□□□ 0.17
GDNFP39905 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.09■□□□□ 0.17
GDNFP39905 AC138028.4-201ENST00000564984 1845 ntBASIC16.09■□□□□ 0.17
GDNFP39905 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.09■□□□□ 0.17
GDNFP39905 AP006587.1-201ENST00000534129 1502 ntBASIC16.09■□□□□ 0.17
GDNFP39905 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
GDNFP39905 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GDNFP39905 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GDNFP39905 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
GDNFP39905 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GDNFP39905 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GDNFP39905 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
GDNFP39905 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
GDNFP39905 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
GDNFP39905 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.08■□□□□ 0.17
GDNFP39905 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.08■□□□□ 0.16
GDNFP39905 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
GDNFP39905 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms