Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.1■□□□□ 0.33
LCN1P31025 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.1■□□□□ 0.33
LCN1P31025 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.1■□□□□ 0.33
LCN1P31025 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.1■□□□□ 0.33
LCN1P31025 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LCN1P31025 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.1■□□□□ 0.33
LCN1P31025 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.1■□□□□ 0.33
LCN1P31025 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.1■□□□□ 0.33
LCN1P31025 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.1■□□□□ 0.33
LCN1P31025 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.1■□□□□ 0.33
LCN1P31025 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LCN1P31025 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LCN1P31025 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 MYLKP1-201ENST00000509077 1580 ntBASIC17.1■□□□□ 0.33
LCN1P31025 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LCN1P31025 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCN1P31025 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LCN1P31025 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.09■□□□□ 0.33
LCN1P31025 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.09■□□□□ 0.33
LCN1P31025 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LCN1P31025 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LCN1P31025 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LCN1P31025 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LCN1P31025 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.09■□□□□ 0.33
LCN1P31025 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.09■□□□□ 0.33
LCN1P31025 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.09■□□□□ 0.33
LCN1P31025 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LCN1P31025 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LCN1P31025 AC097493.4-201ENST00000641197 219 ntBASIC17.09■□□□□ 0.33
LCN1P31025 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LCN1P31025 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.09■□□□□ 0.33
LCN1P31025 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 AC020916.1-201ENST00000587762 1774 ntBASIC17.09■□□□□ 0.33
LCN1P31025 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.09■□□□□ 0.33
LCN1P31025 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
LCN1P31025 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LCN1P31025 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LCN1P31025 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCN1P31025 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P31025 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P31025 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P31025 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P31025 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.08■□□□□ 0.33
LCN1P31025 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P31025 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P31025 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P31025 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P31025 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCN1P31025 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P31025 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.08■□□□□ 0.32
LCN1P31025 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LCN1P31025 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LCN1P31025 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCN1P31025 INGX-201ENST00000359239 846 ntBASIC17.08■□□□□ 0.32
LCN1P31025 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.08■□□□□ 0.32
LCN1P31025 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.08■□□□□ 0.32
LCN1P31025 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.08■□□□□ 0.32
LCN1P31025 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.08■□□□□ 0.32
LCN1P31025 ECEL1P2-202ENST00000465689 757 ntBASIC17.08■□□□□ 0.32
LCN1P31025 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.08■□□□□ 0.32
LCN1P31025 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms