Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PTPN6P29350 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN6P29350 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PTPN6P29350 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN6P29350 AC008622.2-201ENST00000617006 1229 ntBASIC17.55■□□□□ 0.4
PTPN6P29350 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN6P29350 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN6P29350 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN6P29350 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
PTPN6P29350 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN6P29350 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN6P29350 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN6P29350 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN6P29350 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PTPN6P29350 MYLKP1-201ENST00000509077 1580 ntBASIC17.54■□□□□ 0.4
PTPN6P29350 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PTPN6P29350 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN6P29350 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN6P29350 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PTPN6P29350 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN6P29350 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN6P29350 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN6P29350 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN6P29350 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTPN6P29350 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN6P29350 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN6P29350 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPN6P29350 MMP23A-201ENST00000234610 1017 ntBASIC17.53■□□□□ 0.4
PTPN6P29350 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTPN6P29350 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTPN6P29350 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 AC087499.1-201ENST00000418141 1075 ntBASIC17.53■□□□□ 0.4
PTPN6P29350 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN6P29350 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN6P29350 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN6P29350 FITM1-202ENST00000559294 800 ntBASIC17.53■□□□□ 0.4
PTPN6P29350 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPN6P29350 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PTPN6P29350 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTPN6P29350 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PTPN6P29350 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PTPN6P29350 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN6P29350 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTPN6P29350 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTPN6P29350 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PTPN6P29350 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PTPN6P29350 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PTPN6P29350 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN6P29350 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.52■□□□□ 0.4
PTPN6P29350 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms