Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
VARSP26640 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 BICD1-207ENST00000551848 1962 ntBASIC18.17■□□□□ 0.5
VARSP26640 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.17■□□□□ 0.5
VARSP26640 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
VARSP26640 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.16■□□□□ 0.5
VARSP26640 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.16■□□□□ 0.5
VARSP26640 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.16■□□□□ 0.5
VARSP26640 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
VARSP26640 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VARSP26640 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
VARSP26640 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VARSP26640 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VARSP26640 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.16■□□□□ 0.5
VARSP26640 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.16■□□□□ 0.5
VARSP26640 AL390955.1-201ENST00000428694 934 ntBASIC18.16■□□□□ 0.5
VARSP26640 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.16■□□□□ 0.5
VARSP26640 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.16■□□□□ 0.5
VARSP26640 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.16■□□□□ 0.5
VARSP26640 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.16■□□□□ 0.5
VARSP26640 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.16■□□□□ 0.5
VARSP26640 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
VARSP26640 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
VARSP26640 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VARSP26640 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.16■□□□□ 0.5
VARSP26640 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.16■□□□□ 0.5
VARSP26640 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARSP26640 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.15■□□□□ 0.5
VARSP26640 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.15■□□□□ 0.5
VARSP26640 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
VARSP26640 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.15■□□□□ 0.5
VARSP26640 MIR1238-201ENST00000408483 83 ntBASIC18.15■□□□□ 0.5
VARSP26640 FITM1-202ENST00000559294 800 ntBASIC18.15■□□□□ 0.5
VARSP26640 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.15■□□□□ 0.5
VARSP26640 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.15■□□□□ 0.5
VARSP26640 AC008622.2-201ENST00000617006 1229 ntBASIC18.15■□□□□ 0.5
VARSP26640 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.15■□□□□ 0.5
VARSP26640 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.15■□□□□ 0.5
VARSP26640 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VARSP26640 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 HEIH-201ENST00000623091 1652 ntBASIC18.15■□□□□ 0.5
VARSP26640 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARSP26640 TNRC18P3-201ENST00000441896 2691 ntBASIC18.15■□□□□ 0.5
VARSP26640 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.14■□□□□ 0.5
VARSP26640 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VARSP26640 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
VARSP26640 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VARSP26640 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.14■□□□□ 0.49
VARSP26640 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VARSP26640 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VARSP26640 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.14■□□□□ 0.49
VARSP26640 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.14■□□□□ 0.49
VARSP26640 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.14■□□□□ 0.49
VARSP26640 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms