Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCL1P22362 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCL1P22362 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL1P22362 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCL1P22362 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL1P22362 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL1P22362 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.91■□□□□ 0.14
CCL1P22362 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.91■□□□□ 0.14
CCL1P22362 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.91■□□□□ 0.14
CCL1P22362 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.91■□□□□ 0.14
CCL1P22362 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL1P22362 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CCL1P22362 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CCL1P22362 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CCL1P22362 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCL1P22362 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL1P22362 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL1P22362 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CCL1P22362 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCL1P22362 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL1P22362 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL1P22362 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL1P22362 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 TSPY17P-201ENST00000450329 467 ntBASIC15.9■□□□□ 0.14
CCL1P22362 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.9■□□□□ 0.14
CCL1P22362 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.9■□□□□ 0.14
CCL1P22362 AL353719.1-201ENST00000566847 864 ntBASIC15.9■□□□□ 0.14
CCL1P22362 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCL1P22362 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.9■□□□□ 0.14
CCL1P22362 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.9■□□□□ 0.14
CCL1P22362 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCL1P22362 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCL1P22362 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCL1P22362 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.9■□□□□ 0.14
CCL1P22362 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.9■□□□□ 0.14
CCL1P22362 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL1P22362 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCL1P22362 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL1P22362 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
CCL1P22362 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCL1P22362 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
CCL1P22362 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL1P22362 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.89■□□□□ 0.13
CCL1P22362 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL1P22362 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL1P22362 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL1P22362 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.89■□□□□ 0.13
CCL1P22362 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL1P22362 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.89■□□□□ 0.13
CCL1P22362 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.89■□□□□ 0.13
CCL1P22362 AP003041.3-201ENST00000527151 707 ntBASIC15.89■□□□□ 0.13
CCL1P22362 AP003071.4-201ENST00000562276 1284 ntBASIC15.89■□□□□ 0.13
CCL1P22362 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL1P22362 Z99916.2-201ENST00000604037 246 ntBASIC15.89■□□□□ 0.13
CCL1P22362 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL1P22362 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCL1P22362 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.89■□□□□ 0.13
CCL1P22362 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms