Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH3P22223 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDH3P22223 AC063952.2-201ENST00000498792 1227 ntBASIC18.1■□□□□ 0.49
CDH3P22223 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH3P22223 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH3P22223 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDH3P22223 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH3P22223 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH3P22223 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH3P22223 AC036111.1-201ENST00000533973 1582 ntBASIC18.09■□□□□ 0.49
CDH3P22223 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDH3P22223 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH3P22223 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH3P22223 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH3P22223 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH3P22223 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH3P22223 AC087388.1-201ENST00000571370 1112 ntBASIC18.09■□□□□ 0.49
CDH3P22223 NEK4P2-201ENST00000580004 1012 ntBASIC18.09■□□□□ 0.49
CDH3P22223 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH3P22223 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH3P22223 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH3P22223 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH3P22223 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH3P22223 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH3P22223 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH3P22223 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
CDH3P22223 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CDH3P22223 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH3P22223 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
CDH3P22223 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH3P22223 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH3P22223 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH3P22223 AC018470.1-201ENST00000624790 3129 ntBASIC18.08■□□□□ 0.49
CDH3P22223 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH3P22223 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH3P22223 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH3P22223 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH3P22223 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDH3P22223 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH3P22223 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH3P22223 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH3P22223 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH3P22223 MIR3180-5-201ENST00000583743 153 ntBASIC18.08■□□□□ 0.48
CDH3P22223 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH3P22223 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH3P22223 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CDH3P22223 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH3P22223 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH3P22223 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH3P22223 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH3P22223 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH3P22223 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH3P22223 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH3P22223 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH3P22223 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH3P22223 AL512353.2-201ENST00000448759 1962 ntBASIC18.08■□□□□ 0.48
CDH3P22223 RCC2P3-201ENST00000418112 1537 ntBASIC18.08■□□□□ 0.48
CDH3P22223 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDH3P22223 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH3P22223 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH3P22223 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH3P22223 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH3P22223 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
CDH3P22223 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH3P22223 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDH3P22223 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDH3P22223 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH3P22223 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH3P22223 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH3P22223 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH3P22223 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH3P22223 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH3P22223 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms