Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.02■□□□□ 0.31
THBS1P07996 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
THBS1P07996 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
THBS1P07996 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
THBS1P07996 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.01■□□□□ 0.31
THBS1P07996 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
THBS1P07996 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
THBS1P07996 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
THBS1P07996 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
THBS1P07996 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.01■□□□□ 0.31
THBS1P07996 AC087499.1-201ENST00000418141 1075 ntBASIC17.01■□□□□ 0.31
THBS1P07996 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.01■□□□□ 0.31
THBS1P07996 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
THBS1P07996 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
THBS1P07996 AL355075.4-201ENST00000554988 638 ntBASIC17.01■□□□□ 0.31
THBS1P07996 AP000525.1-201ENST00000608286 694 ntBASIC17.01■□□□□ 0.31
THBS1P07996 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
THBS1P07996 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
THBS1P07996 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.01■□□□□ 0.31
THBS1P07996 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
THBS1P07996 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
THBS1P07996 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
THBS1P07996 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
THBS1P07996 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.01■□□□□ 0.31
THBS1P07996 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
THBS1P07996 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17■□□□□ 0.31
THBS1P07996 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
THBS1P07996 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
THBS1P07996 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17■□□□□ 0.31
THBS1P07996 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17■□□□□ 0.31
THBS1P07996 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
THBS1P07996 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
THBS1P07996 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
THBS1P07996 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17■□□□□ 0.31
THBS1P07996 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17■□□□□ 0.31
THBS1P07996 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17■□□□□ 0.31
THBS1P07996 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17■□□□□ 0.31
THBS1P07996 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17■□□□□ 0.31
THBS1P07996 GMCL1P1-201ENST00000463439 1581 ntBASIC17■□□□□ 0.31
THBS1P07996 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17■□□□□ 0.31
THBS1P07996 C2orf69P3-201ENST00000565542 1120 ntBASIC17■□□□□ 0.31
THBS1P07996 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17■□□□□ 0.31
THBS1P07996 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
THBS1P07996 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
THBS1P07996 AC116562.4-202ENST00000641738 218 ntBASIC17■□□□□ 0.31
THBS1P07996 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17■□□□□ 0.31
THBS1P07996 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17■□□□□ 0.31
THBS1P07996 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.99■□□□□ 0.31
THBS1P07996 ESPNP-201ENST00000270691 2015 ntBASIC16.99■□□□□ 0.31
THBS1P07996 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.99■□□□□ 0.31
THBS1P07996 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
THBS1P07996 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.99■□□□□ 0.31
THBS1P07996 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
THBS1P07996 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
THBS1P07996 MIR149-201ENST00000384879 89 ntBASIC16.99■□□□□ 0.31
THBS1P07996 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.99■□□□□ 0.31
THBS1P07996 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms