Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
HMGN1P05114 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGN1P05114 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
HMGN1P05114 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGN1P05114 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGN1P05114 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HMGN1P05114 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.77■□□□□ 0.27
HMGN1P05114 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
HMGN1P05114 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGN1P05114 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HMGN1P05114 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HMGN1P05114 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 RCC2P3-201ENST00000418112 1537 ntBASIC16.76■□□□□ 0.27
HMGN1P05114 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
HMGN1P05114 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.76■□□□□ 0.27
HMGN1P05114 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGN1P05114 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGN1P05114 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 AC004980.1-204ENST00000429707 299 ntBASIC16.76■□□□□ 0.27
HMGN1P05114 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGN1P05114 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.76■□□□□ 0.27
HMGN1P05114 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.76■□□□□ 0.27
HMGN1P05114 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.76■□□□□ 0.27
HMGN1P05114 AL023875.1-201ENST00000640777 796 ntBASIC16.76■□□□□ 0.27
HMGN1P05114 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGN1P05114 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HMGN1P05114 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HMGN1P05114 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGN1P05114 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGN1P05114 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGN1P05114 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGN1P05114 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HMGN1P05114 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGN1P05114 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HMGN1P05114 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGN1P05114 AC011270.2-201ENST00000624293 2550 ntBASIC16.75■□□□□ 0.27
HMGN1P05114 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HMGN1P05114 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
HMGN1P05114 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGN1P05114 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGN1P05114 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HMGN1P05114 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.75■□□□□ 0.27
HMGN1P05114 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HMGN1P05114 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGN1P05114 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HMGN1P05114 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HMGN1P05114 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HMGN1P05114 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
HMGN1P05114 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.74■□□□□ 0.27
HMGN1P05114 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
HMGN1P05114 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.74■□□□□ 0.27
HMGN1P05114 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGN1P05114 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HMGN1P05114 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HMGN1P05114 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGN1P05114 AC004951.3-201ENST00000418645 1148 ntBASIC16.74■□□□□ 0.27
HMGN1P05114 NIFKP9-201ENST00000419265 221 ntBASIC16.74■□□□□ 0.27
HMGN1P05114 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HMGN1P05114 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.74■□□□□ 0.27
HMGN1P05114 AC091390.4-202ENST00000476426 537 ntBASIC16.74■□□□□ 0.27
HMGN1P05114 AC026366.1-201ENST00000488803 879 ntBASIC16.74■□□□□ 0.27
HMGN1P05114 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HMGN1P05114 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGN1P05114 AC104771.1-201ENST00000603335 964 ntBASIC16.74■□□□□ 0.27
HMGN1P05114 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms