Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRAP04437 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRAP04437 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.09□□□□□ -0.15
TCRAP04437 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TCRAP04437 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRAP04437 AC012317.2-201ENST00000623305 2251 ntBASIC14.09□□□□□ -0.15
TCRAP04437 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRAP04437 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRAP04437 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.09□□□□□ -0.15
TCRAP04437 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TCRAP04437 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRAP04437 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TCRAP04437 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TCRAP04437 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TCRAP04437 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.08□□□□□ -0.15
TCRAP04437 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TCRAP04437 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TCRAP04437 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.08□□□□□ -0.15
TCRAP04437 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TCRAP04437 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
TCRAP04437 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.08□□□□□ -0.16
TCRAP04437 CROCCP5-201ENST00000436658 830 ntBASIC14.08□□□□□ -0.16
TCRAP04437 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRAP04437 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
TCRAP04437 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRAP04437 RARRES2P6-201ENST00000567333 442 ntBASIC14.08□□□□□ -0.16
TCRAP04437 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.08□□□□□ -0.16
TCRAP04437 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TCRAP04437 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRAP04437 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.08□□□□□ -0.16
TCRAP04437 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TCRAP04437 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRAP04437 MYLKP1-201ENST00000509077 1580 ntBASIC14.08□□□□□ -0.16
TCRAP04437 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.08□□□□□ -0.16
TCRAP04437 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TCRAP04437 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TCRAP04437 NBPF21P-201ENST00000425093 1451 ntBASIC14.07□□□□□ -0.16
TCRAP04437 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
TCRAP04437 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TCRAP04437 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
TCRAP04437 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TCRAP04437 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.07□□□□□ -0.16
TCRAP04437 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRAP04437 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.07□□□□□ -0.16
TCRAP04437 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.07□□□□□ -0.16
TCRAP04437 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRAP04437 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.07□□□□□ -0.16
TCRAP04437 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TCRAP04437 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.07□□□□□ -0.16
TCRAP04437 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TCRAP04437 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.07□□□□□ -0.16
TCRAP04437 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TCRAP04437 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TCRAP04437 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TCRAP04437 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRAP04437 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.06□□□□□ -0.16
TCRAP04437 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRAP04437 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TCRAP04437 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRAP04437 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRAP04437 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRAP04437 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TCRAP04437 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRAP04437 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRAP04437 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.06□□□□□ -0.16
TCRAP04437 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRAP04437 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRAP04437 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TCRAP04437 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms