Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 LETM1P2-201ENST00000597330 2178 ntBASIC16.19■□□□□ 0.18
LCATP04180 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LCATP04180 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.19■□□□□ 0.18
LCATP04180 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LCATP04180 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 AL355075.4-201ENST00000554988 638 ntBASIC16.19■□□□□ 0.18
LCATP04180 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LCATP04180 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LCATP04180 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.19■□□□□ 0.18
LCATP04180 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LCATP04180 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
LCATP04180 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCATP04180 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.18■□□□□ 0.18
LCATP04180 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.18■□□□□ 0.18
LCATP04180 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 SLC25A1P2-201ENST00000430693 912 ntBASIC16.18■□□□□ 0.18
LCATP04180 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 FITM1-202ENST00000559294 800 ntBASIC16.18■□□□□ 0.18
LCATP04180 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.18■□□□□ 0.18
LCATP04180 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LCATP04180 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
LCATP04180 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCATP04180 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.18■□□□□ 0.18
LCATP04180 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.17■□□□□ 0.18
LCATP04180 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 AC073592.3-201ENST00000625118 1834 ntBASIC16.17■□□□□ 0.18
LCATP04180 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LCATP04180 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LCATP04180 MIR564-202ENST00000385049 94 ntBASIC16.17■□□□□ 0.18
LCATP04180 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 CCR12P-201ENST00000446203 998 ntBASIC16.17■□□□□ 0.18
LCATP04180 TSPY17P-201ENST00000450329 467 ntBASIC16.17■□□□□ 0.18
LCATP04180 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.17■□□□□ 0.18
LCATP04180 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LCATP04180 C2orf69P3-201ENST00000565542 1120 ntBASIC16.17■□□□□ 0.18
LCATP04180 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.17■□□□□ 0.18
LCATP04180 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCATP04180 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LCATP04180 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.16■□□□□ 0.18
LCATP04180 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms