Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MT-CO1P00395 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MT-CO1P00395 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.95■□□□□ 0.62
MT-CO1P00395 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 Z98044.1-201ENST00000632503 1764 ntBASIC18.94■□□□□ 0.62
MT-CO1P00395 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MT-CO1P00395 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MT-CO1P00395 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.94■□□□□ 0.62
MT-CO1P00395 AC112907.2-201ENST00000448639 330 ntBASIC18.94■□□□□ 0.62
MT-CO1P00395 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.94■□□□□ 0.62
MT-CO1P00395 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.94■□□□□ 0.62
MT-CO1P00395 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.94■□□□□ 0.62
MT-CO1P00395 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.94■□□□□ 0.62
MT-CO1P00395 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
MT-CO1P00395 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.94■□□□□ 0.62
MT-CO1P00395 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
MT-CO1P00395 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MT-CO1P00395 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
MT-CO1P00395 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
MT-CO1P00395 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.94■□□□□ 0.62
MT-CO1P00395 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 AC034236.2-201ENST00000606662 1610 ntBASIC18.93■□□□□ 0.62
MT-CO1P00395 HOXB1-202ENST00000577092 1414 ntBASIC18.93■□□□□ 0.62
MT-CO1P00395 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
MT-CO1P00395 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MT-CO1P00395 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.93■□□□□ 0.62
MT-CO1P00395 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MT-CO1P00395 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 AL671277.2-201ENST00000458060 996 ntBASIC18.93■□□□□ 0.62
MT-CO1P00395 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 RASA4DP-201ENST00000460726 1199 ntBASIC18.93■□□□□ 0.62
MT-CO1P00395 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.93■□□□□ 0.62
MT-CO1P00395 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.93■□□□□ 0.62
MT-CO1P00395 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
MT-CO1P00395 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
MT-CO1P00395 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.93■□□□□ 0.62
MT-CO1P00395 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.93■□□□□ 0.62
MT-CO1P00395 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-CO1P00395 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.92■□□□□ 0.62
MT-CO1P00395 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.92■□□□□ 0.62
MT-CO1P00395 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MT-CO1P00395 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
MT-CO1P00395 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.92■□□□□ 0.62
MT-CO1P00395 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 AC092597.1-201ENST00000487352 616 ntBASIC18.92■□□□□ 0.62
MT-CO1P00395 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.92■□□□□ 0.62
MT-CO1P00395 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.92■□□□□ 0.62
MT-CO1P00395 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MT-CO1P00395 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
MT-CO1P00395 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.92■□□□□ 0.62
MT-CO1P00395 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.92■□□□□ 0.62
MT-CO1P00395 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.92■□□□□ 0.62
MT-CO1P00395 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MT-CO1P00395 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
MT-CO1P00395 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-CO1P00395 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
MT-CO1P00395 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MT-CO1P00395 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms