Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 AC074051.2-201ENST00000565115 352 ntBASIC15.47■□□□□ 0.07
ABCA1O95477 BX640515.1-201ENST00000617215 977 ntBASIC15.47■□□□□ 0.07
ABCA1O95477 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ABCA1O95477 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ABCA1O95477 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ABCA1O95477 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.47■□□□□ 0.07
ABCA1O95477 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ABCA1O95477 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.47■□□□□ 0.07
ABCA1O95477 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.47■□□□□ 0.07
ABCA1O95477 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.47■□□□□ 0.07
ABCA1O95477 AL023284.2-201ENST00000405850 579 ntBASIC15.47■□□□□ 0.07
ABCA1O95477 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.47■□□□□ 0.07
ABCA1O95477 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.47■□□□□ 0.07
ABCA1O95477 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.47■□□□□ 0.07
ABCA1O95477 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ABCA1O95477 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ABCA1O95477 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.47■□□□□ 0.07
ABCA1O95477 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
ABCA1O95477 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.47■□□□□ 0.07
ABCA1O95477 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.46■□□□□ 0.07
ABCA1O95477 AC104819.1-201ENST00000504587 486 ntBASIC15.46■□□□□ 0.07
ABCA1O95477 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.46■□□□□ 0.07
ABCA1O95477 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.46■□□□□ 0.07
ABCA1O95477 MIR3917-201ENST00000580971 93 ntBASIC15.46■□□□□ 0.07
ABCA1O95477 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.46■□□□□ 0.07
ABCA1O95477 AL121912.1-201ENST00000603683 238 ntBASIC15.46■□□□□ 0.07
ABCA1O95477 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ABCA1O95477 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.46■□□□□ 0.07
ABCA1O95477 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ABCA1O95477 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.46■□□□□ 0.07
ABCA1O95477 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.46■□□□□ 0.07
ABCA1O95477 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ABCA1O95477 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.46■□□□□ 0.07
ABCA1O95477 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ABCA1O95477 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 AL032819.2-201ENST00000624543 2162 ntBASIC15.46■□□□□ 0.07
ABCA1O95477 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.46■□□□□ 0.07
ABCA1O95477 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ABCA1O95477 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.46■□□□□ 0.07
ABCA1O95477 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
ABCA1O95477 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.46■□□□□ 0.06
ABCA1O95477 RNA5SP419-201ENST00000515908 135 ntBASIC15.46■□□□□ 0.06
ABCA1O95477 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.46■□□□□ 0.06
ABCA1O95477 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
ABCA1O95477 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ABCA1O95477 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
ABCA1O95477 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.06
ABCA1O95477 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.45■□□□□ 0.06
ABCA1O95477 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
ABCA1O95477 SDHAP1-207ENST00000440850 2000 ntBASIC15.45■□□□□ 0.06
ABCA1O95477 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.45■□□□□ 0.06
ABCA1O95477 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
ABCA1O95477 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
ABCA1O95477 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.45■□□□□ 0.06
ABCA1O95477 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.45■□□□□ 0.06
ABCA1O95477 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.45■□□□□ 0.06
ABCA1O95477 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
ABCA1O95477 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ABCA1O95477 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms