Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.15■□□□□ 0.02
SCAF4O95104 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.15■□□□□ 0.02
SCAF4O95104 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.15■□□□□ 0.02
SCAF4O95104 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SCAF4O95104 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.15■□□□□ 0.02
SCAF4O95104 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SCAF4O95104 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAF4O95104 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SCAF4O95104 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAF4O95104 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SCAF4O95104 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAF4O95104 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.14■□□□□ 0.01
SCAF4O95104 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAF4O95104 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.14■□□□□ 0.01
SCAF4O95104 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAF4O95104 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.14■□□□□ 0.01
SCAF4O95104 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SCAF4O95104 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAF4O95104 AC006557.6-201ENST00000623071 864 ntBASIC15.14■□□□□ 0.01
SCAF4O95104 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SCAF4O95104 AC124067.4-201ENST00000519691 2379 ntBASIC15.14■□□□□ 0.01
SCAF4O95104 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.14■□□□□ 0.01
SCAF4O95104 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 LINC00896-202ENST00000609602 2128 ntBASIC15.14■□□□□ 0.01
SCAF4O95104 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SCAF4O95104 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SCAF4O95104 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.14■□□□□ 0.01
SCAF4O95104 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAF4O95104 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.14■□□□□ 0.01
SCAF4O95104 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SCAF4O95104 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.13■□□□□ 0.01
SCAF4O95104 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SCAF4O95104 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.13■□□□□ 0.01
SCAF4O95104 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.13■□□□□ 0.01
SCAF4O95104 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.13■□□□□ 0.01
SCAF4O95104 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.13■□□□□ 0.01
SCAF4O95104 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SCAF4O95104 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
SCAF4O95104 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.13■□□□□ 0.01
SCAF4O95104 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.13■□□□□ 0.01
SCAF4O95104 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.13■□□□□ 0.01
SCAF4O95104 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 MIR4651-201ENST00000582622 73 ntBASIC15.13■□□□□ 0.01
SCAF4O95104 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SCAF4O95104 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.13■□□□□ 0.01
SCAF4O95104 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SCAF4O95104 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SCAF4O95104 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.13■□□□□ 0.01
SCAF4O95104 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms