Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PLOD3O60568 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PLOD3O60568 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PLOD3O60568 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PLOD3O60568 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PLOD3O60568 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PLOD3O60568 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PLOD3O60568 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PLOD3O60568 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.43■□□□□ 0.38
PLOD3O60568 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PLOD3O60568 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PLOD3O60568 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.42■□□□□ 0.38
PLOD3O60568 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.42■□□□□ 0.38
PLOD3O60568 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.42■□□□□ 0.38
PLOD3O60568 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.42■□□□□ 0.38
PLOD3O60568 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PLOD3O60568 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.42■□□□□ 0.38
PLOD3O60568 PKD1P1-201ENST00000458669 6805 ntBASIC17.42■□□□□ 0.38
PLOD3O60568 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.42■□□□□ 0.38
PLOD3O60568 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PLOD3O60568 AC128688.1-201ENST00000487626 519 ntBASIC17.42■□□□□ 0.38
PLOD3O60568 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.42■□□□□ 0.38
PLOD3O60568 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.42■□□□□ 0.38
PLOD3O60568 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.42■□□□□ 0.38
PLOD3O60568 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PLOD3O60568 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PLOD3O60568 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PLOD3O60568 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.42■□□□□ 0.38
PLOD3O60568 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.41■□□□□ 0.38
PLOD3O60568 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.41■□□□□ 0.38
PLOD3O60568 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.41■□□□□ 0.38
PLOD3O60568 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PLOD3O60568 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PLOD3O60568 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.41■□□□□ 0.38
PLOD3O60568 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PLOD3O60568 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.41■□□□□ 0.38
PLOD3O60568 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PLOD3O60568 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PLOD3O60568 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.41■□□□□ 0.38
PLOD3O60568 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.41■□□□□ 0.38
PLOD3O60568 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PLOD3O60568 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.41■□□□□ 0.38
PLOD3O60568 WWOX-216ENST00000569818 525 ntBASIC17.41■□□□□ 0.38
PLOD3O60568 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PLOD3O60568 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PLOD3O60568 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.41■□□□□ 0.38
PLOD3O60568 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PLOD3O60568 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PLOD3O60568 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
PLOD3O60568 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.4■□□□□ 0.38
PLOD3O60568 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
PLOD3O60568 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PLOD3O60568 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.4■□□□□ 0.38
PLOD3O60568 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PLOD3O60568 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.4■□□□□ 0.38
PLOD3O60568 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PLOD3O60568 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.4■□□□□ 0.38
PLOD3O60568 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PLOD3O60568 AC073592.3-201ENST00000625118 1834 ntBASIC17.4■□□□□ 0.38
PLOD3O60568 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PLOD3O60568 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
PLOD3O60568 AC034236.2-201ENST00000606662 1610 ntBASIC17.39■□□□□ 0.38
PLOD3O60568 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PLOD3O60568 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PLOD3O60568 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
PLOD3O60568 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PLOD3O60568 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PLOD3O60568 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PLOD3O60568 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PLOD3O60568 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PLOD3O60568 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms