Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.99■□□□□ 0.95
CCNT1O60563 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.98■□□□□ 0.95
CCNT1O60563 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNT1O60563 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNT1O60563 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.98■□□□□ 0.95
CCNT1O60563 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
CCNT1O60563 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNT1O60563 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNT1O60563 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNT1O60563 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.98■□□□□ 0.95
CCNT1O60563 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNT1O60563 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNT1O60563 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCNT1O60563 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNT1O60563 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.98■□□□□ 0.95
CCNT1O60563 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.98■□□□□ 0.95
CCNT1O60563 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.98■□□□□ 0.95
CCNT1O60563 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.98■□□□□ 0.95
CCNT1O60563 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.98■□□□□ 0.95
CCNT1O60563 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
CCNT1O60563 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.98■□□□□ 0.95
CCNT1O60563 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
CCNT1O60563 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.98■□□□□ 0.95
CCNT1O60563 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCNT1O60563 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CCNT1O60563 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.97■□□□□ 0.95
CCNT1O60563 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 RNF152P1-201ENST00000397754 604 ntBASIC20.97■□□□□ 0.95
CCNT1O60563 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCNT1O60563 TSPY5P-201ENST00000426936 936 ntBASIC20.97■□□□□ 0.95
CCNT1O60563 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.97■□□□□ 0.95
CCNT1O60563 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.97■□□□□ 0.95
CCNT1O60563 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CCNT1O60563 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 MIR3917-201ENST00000580971 93 ntBASIC20.97■□□□□ 0.95
CCNT1O60563 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 AC090164.3-201ENST00000610780 2143 ntBASIC20.97■□□□□ 0.95
CCNT1O60563 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCNT1O60563 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCNT1O60563 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
CCNT1O60563 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.97■□□□□ 0.95
CCNT1O60563 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCNT1O60563 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.97■□□□□ 0.95
CCNT1O60563 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.96■□□□□ 0.95
CCNT1O60563 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNT1O60563 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.96■□□□□ 0.95
CCNT1O60563 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNT1O60563 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.96■□□□□ 0.95
CCNT1O60563 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNT1O60563 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNT1O60563 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNT1O60563 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.96■□□□□ 0.95
CCNT1O60563 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CCNT1O60563 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNT1O60563 AL157888.1-201ENST00000631930 593 ntBASIC20.96■□□□□ 0.95
CCNT1O60563 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNT1O60563 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.96■□□□□ 0.95
CCNT1O60563 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.96■□□□□ 0.95
CCNT1O60563 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms