Protein–RNA interactions for Protein: O60318

MCM3AP, Germinal-center associated nuclear protein, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3APO60318 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
MCM3APO60318 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.65■□□□□ 0.9
MCM3APO60318 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MCM3APO60318 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.65■□□□□ 0.9
MCM3APO60318 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MCM3APO60318 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.65■□□□□ 0.9
MCM3APO60318 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MCM3APO60318 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MCM3APO60318 AL138831.2-201ENST00000606564 490 ntBASIC20.65■□□□□ 0.9
MCM3APO60318 IGHV3-41-201ENST00000613121 348 ntBASIC20.65■□□□□ 0.9
MCM3APO60318 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MCM3APO60318 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MCM3APO60318 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MCM3APO60318 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MCM3APO60318 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.64■□□□□ 0.89
MCM3APO60318 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MCM3APO60318 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MCM3APO60318 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MCM3APO60318 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
MCM3APO60318 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MCM3APO60318 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.64■□□□□ 0.89
MCM3APO60318 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.64■□□□□ 0.89
MCM3APO60318 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.64■□□□□ 0.89
MCM3APO60318 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.64■□□□□ 0.89
MCM3APO60318 BX640515.1-201ENST00000617215 977 ntBASIC20.64■□□□□ 0.89
MCM3APO60318 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MCM3APO60318 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MCM3APO60318 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MCM3APO60318 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MCM3APO60318 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MCM3APO60318 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCM3APO60318 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCM3APO60318 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCM3APO60318 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
MCM3APO60318 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCM3APO60318 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.63■□□□□ 0.89
MCM3APO60318 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MCM3APO60318 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
MCM3APO60318 AC079776.4-201ENST00000511039 504 ntBASIC20.63■□□□□ 0.89
MCM3APO60318 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.63■□□□□ 0.89
MCM3APO60318 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.63■□□□□ 0.89
MCM3APO60318 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.63■□□□□ 0.89
MCM3APO60318 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.63■□□□□ 0.89
MCM3APO60318 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.63■□□□□ 0.89
MCM3APO60318 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MCM3APO60318 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.63■□□□□ 0.89
MCM3APO60318 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCM3APO60318 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MCM3APO60318 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.63■□□□□ 0.89
MCM3APO60318 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.63■□□□□ 0.89
MCM3APO60318 FAM197Y8-203ENST00000450145 560 ntBASIC20.63■□□□□ 0.89
MCM3APO60318 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.63■□□□□ 0.89
MCM3APO60318 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.63■□□□□ 0.89
MCM3APO60318 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MCM3APO60318 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.62■□□□□ 0.89
MCM3APO60318 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.62■□□□□ 0.89
MCM3APO60318 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.62■□□□□ 0.89
MCM3APO60318 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MCM3APO60318 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.62■□□□□ 0.89
MCM3APO60318 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.62■□□□□ 0.89
MCM3APO60318 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.62■□□□□ 0.89
MCM3APO60318 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MCM3APO60318 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.61■□□□□ 0.89
MCM3APO60318 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
MCM3APO60318 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MCM3APO60318 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.61■□□□□ 0.89
MCM3APO60318 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MCM3APO60318 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.61■□□□□ 0.89
MCM3APO60318 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 AC005332.7-201ENST00000614046 2005 ntBASIC20.61■□□□□ 0.89
MCM3APO60318 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 SDHAP2-201ENST00000455183 2001 ntBASIC20.61■□□□□ 0.89
MCM3APO60318 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.61■□□□□ 0.89
MCM3APO60318 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.61■□□□□ 0.89
MCM3APO60318 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.61■□□□□ 0.89
MCM3APO60318 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.61■□□□□ 0.89
MCM3APO60318 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
MCM3APO60318 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.61■□□□□ 0.89
MCM3APO60318 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.61■□□□□ 0.89
MCM3APO60318 AF228730.7-201ENST00000641842 219 ntBASIC20.61■□□□□ 0.89
MCM3APO60318 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.61■□□□□ 0.89
MCM3APO60318 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MCM3APO60318 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
MCM3APO60318 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MCM3APO60318 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MCM3APO60318 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MCM3APO60318 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MCM3APO60318 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms