Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SSX4O60224 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX4O60224 AC126763.1-201ENST00000552015 2118 ntBASIC16.78■□□□□ 0.28
SSX4O60224 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSX4O60224 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SSX4O60224 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSX4O60224 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSX4O60224 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.77■□□□□ 0.28
SSX4O60224 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SSX4O60224 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSX4O60224 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSX4O60224 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSX4O60224 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.77■□□□□ 0.28
SSX4O60224 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SSX4O60224 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.77■□□□□ 0.28
SSX4O60224 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.77■□□□□ 0.28
SSX4O60224 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.77■□□□□ 0.28
SSX4O60224 AL031963.3-201ENST00000606441 850 ntBASIC16.77■□□□□ 0.28
SSX4O60224 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.77■□□□□ 0.28
SSX4O60224 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSX4O60224 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSX4O60224 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSX4O60224 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
SSX4O60224 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSX4O60224 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SSX4O60224 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SSX4O60224 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSX4O60224 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SSX4O60224 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
SSX4O60224 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SSX4O60224 AC141586.3-201ENST00000562166 1838 ntBASIC16.77■□□□□ 0.27
SSX4O60224 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.77■□□□□ 0.27
SSX4O60224 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SSX4O60224 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSX4O60224 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SSX4O60224 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.77■□□□□ 0.27
SSX4O60224 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SSX4O60224 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.76■□□□□ 0.27
SSX4O60224 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.76■□□□□ 0.27
SSX4O60224 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SSX4O60224 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.76■□□□□ 0.27
SSX4O60224 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 UNC93B2-201ENST00000285383 730 ntBASIC16.76■□□□□ 0.27
SSX4O60224 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
SSX4O60224 NUDT16P1-203ENST00000513809 620 ntBASIC16.76■□□□□ 0.27
SSX4O60224 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.76■□□□□ 0.27
SSX4O60224 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.76■□□□□ 0.27
SSX4O60224 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
SSX4O60224 CR392000.1-201ENST00000624770 1228 ntBASIC16.76■□□□□ 0.27
SSX4O60224 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.76■□□□□ 0.27
SSX4O60224 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.76■□□□□ 0.27
SSX4O60224 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.76■□□□□ 0.27
SSX4O60224 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SSX4O60224 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSX4O60224 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SSX4O60224 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SSX4O60224 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SSX4O60224 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SSX4O60224 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.75■□□□□ 0.27
SSX4O60224 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 PTBP1P-201ENST00000554374 1601 ntBASIC16.75■□□□□ 0.27
SSX4O60224 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSX4O60224 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.75■□□□□ 0.27
SSX4O60224 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.75■□□□□ 0.27
SSX4O60224 TMPOP1-202ENST00000424642 1267 ntBASIC16.75■□□□□ 0.27
SSX4O60224 RBM17P1-201ENST00000453646 1190 ntBASIC16.75■□□□□ 0.27
SSX4O60224 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.75■□□□□ 0.27
SSX4O60224 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.75■□□□□ 0.27
SSX4O60224 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
SSX4O60224 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms