Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP2O43734 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.46■□□□□ 0.23
TRAF3IP2O43734 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 AC104390.1-201ENST00000555663 520 ntBASIC16.46■□□□□ 0.23
TRAF3IP2O43734 NEK4P2-201ENST00000580004 1012 ntBASIC16.46■□□□□ 0.23
TRAF3IP2O43734 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP2O43734 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.46■□□□□ 0.22
TRAF3IP2O43734 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRAF3IP2O43734 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAF3IP2O43734 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 AL163051.1-201ENST00000569214 1512 ntBASIC16.45■□□□□ 0.22
TRAF3IP2O43734 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 AL138966.2-201ENST00000621997 464 ntBASIC16.45■□□□□ 0.22
TRAF3IP2O43734 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAF3IP2O43734 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms