Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SGCEO43556 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
SGCEO43556 AC008556.1-201ENST00000610908 2040 ntBASIC16.35■□□□□ 0.21
SGCEO43556 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SGCEO43556 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 GPAT2P1-201ENST00000444924 1672 ntBASIC16.34■□□□□ 0.21
SGCEO43556 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.34■□□□□ 0.21
SGCEO43556 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
SGCEO43556 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.34■□□□□ 0.21
SGCEO43556 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.34■□□□□ 0.21
SGCEO43556 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SGCEO43556 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.34■□□□□ 0.21
SGCEO43556 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.34■□□□□ 0.21
SGCEO43556 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.34■□□□□ 0.21
SGCEO43556 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.34■□□□□ 0.21
SGCEO43556 CCR12P-201ENST00000446203 998 ntBASIC16.34■□□□□ 0.21
SGCEO43556 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.34■□□□□ 0.21
SGCEO43556 C2orf69P3-201ENST00000565542 1120 ntBASIC16.34■□□□□ 0.21
SGCEO43556 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.34■□□□□ 0.21
SGCEO43556 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.34■□□□□ 0.21
SGCEO43556 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
SGCEO43556 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SGCEO43556 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SGCEO43556 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SGCEO43556 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
SGCEO43556 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SGCEO43556 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SGCEO43556 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SGCEO43556 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SGCEO43556 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SGCEO43556 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SGCEO43556 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SGCEO43556 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SGCEO43556 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SGCEO43556 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SGCEO43556 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.33■□□□□ 0.2
SGCEO43556 TSPY17P-201ENST00000450329 467 ntBASIC16.33■□□□□ 0.2
SGCEO43556 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.33■□□□□ 0.2
SGCEO43556 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SGCEO43556 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SGCEO43556 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SGCEO43556 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SGCEO43556 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SGCEO43556 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 AC090164.3-201ENST00000610780 2143 ntBASIC16.33■□□□□ 0.2
SGCEO43556 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.33■□□□□ 0.2
SGCEO43556 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
SGCEO43556 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SGCEO43556 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SGCEO43556 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SGCEO43556 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.32■□□□□ 0.2
SGCEO43556 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SGCEO43556 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SGCEO43556 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SGCEO43556 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SGCEO43556 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.32■□□□□ 0.2
SGCEO43556 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SGCEO43556 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.32■□□□□ 0.2
SGCEO43556 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.32■□□□□ 0.2
SGCEO43556 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SGCEO43556 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.32■□□□□ 0.2
SGCEO43556 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SGCEO43556 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.32■□□□□ 0.2
SGCEO43556 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.32■□□□□ 0.2
SGCEO43556 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.32■□□□□ 0.2
SGCEO43556 AC112777.1-201ENST00000540175 1423 ntBASIC16.32■□□□□ 0.2
SGCEO43556 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.32■□□□□ 0.2
SGCEO43556 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.32■□□□□ 0.2
SGCEO43556 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.32■□□□□ 0.2
SGCEO43556 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.32■□□□□ 0.2
SGCEO43556 AC066615.1-201ENST00000640911 628 ntBASIC16.32■□□□□ 0.2
SGCEO43556 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SGCEO43556 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SGCEO43556 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SGCEO43556 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms