Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC2O43543 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC2O43543 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC2O43543 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.08■□□□□ 0.17
XRCC2O43543 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC2O43543 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC2O43543 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.08■□□□□ 0.17
XRCC2O43543 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC2O43543 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
XRCC2O43543 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
XRCC2O43543 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
XRCC2O43543 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.08■□□□□ 0.16
XRCC2O43543 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
XRCC2O43543 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.08■□□□□ 0.16
XRCC2O43543 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.08■□□□□ 0.16
XRCC2O43543 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.08■□□□□ 0.16
XRCC2O43543 AL353719.1-201ENST00000566847 864 ntBASIC16.08■□□□□ 0.16
XRCC2O43543 MIR4497-201ENST00000583208 89 ntBASIC16.08■□□□□ 0.16
XRCC2O43543 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.08■□□□□ 0.16
XRCC2O43543 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.08■□□□□ 0.16
XRCC2O43543 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.08■□□□□ 0.16
XRCC2O43543 MYLKP1-201ENST00000509077 1580 ntBASIC16.08■□□□□ 0.16
XRCC2O43543 AL162741.1-201ENST00000565563 1558 ntBASIC16.08■□□□□ 0.16
XRCC2O43543 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
XRCC2O43543 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
XRCC2O43543 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.08■□□□□ 0.16
XRCC2O43543 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
XRCC2O43543 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.08■□□□□ 0.16
XRCC2O43543 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
XRCC2O43543 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.07■□□□□ 0.16
XRCC2O43543 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
XRCC2O43543 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 MIR1238-201ENST00000408483 83 ntBASIC16.07■□□□□ 0.16
XRCC2O43543 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.07■□□□□ 0.16
XRCC2O43543 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.07■□□□□ 0.16
XRCC2O43543 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.07■□□□□ 0.16
XRCC2O43543 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.07■□□□□ 0.16
XRCC2O43543 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.07■□□□□ 0.16
XRCC2O43543 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
XRCC2O43543 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.07■□□□□ 0.16
XRCC2O43543 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.07■□□□□ 0.16
XRCC2O43543 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 AL023803.3-201ENST00000615559 522 ntBASIC16.07■□□□□ 0.16
XRCC2O43543 AC116562.4-202ENST00000641738 218 ntBASIC16.07■□□□□ 0.16
XRCC2O43543 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
XRCC2O43543 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.07■□□□□ 0.16
XRCC2O43543 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.07■□□□□ 0.16
XRCC2O43543 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
XRCC2O43543 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.06■□□□□ 0.16
XRCC2O43543 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XRCC2O43543 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
XRCC2O43543 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.06■□□□□ 0.16
XRCC2O43543 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
XRCC2O43543 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XRCC2O43543 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
XRCC2O43543 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.06■□□□□ 0.16
XRCC2O43543 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
XRCC2O43543 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
XRCC2O43543 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
XRCC2O43543 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
XRCC2O43543 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
XRCC2O43543 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
XRCC2O43543 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XRCC2O43543 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.06■□□□□ 0.16
XRCC2O43543 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
XRCC2O43543 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
XRCC2O43543 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
XRCC2O43543 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.06■□□□□ 0.16
XRCC2O43543 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
XRCC2O43543 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.06■□□□□ 0.16
XRCC2O43543 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.06■□□□□ 0.16
XRCC2O43543 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.06■□□□□ 0.16
XRCC2O43543 BX088651.1-201ENST00000540551 451 ntBASIC16.06■□□□□ 0.16
XRCC2O43543 AL355075.4-201ENST00000554988 638 ntBASIC16.06■□□□□ 0.16
XRCC2O43543 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms