Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.04■■□□□ 1.12
FOXN1O15353 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.04■■□□□ 1.12
FOXN1O15353 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
FOXN1O15353 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.04■■□□□ 1.12
FOXN1O15353 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.04■■□□□ 1.12
FOXN1O15353 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.03■■□□□ 1.12
FOXN1O15353 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN1O15353 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN1O15353 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN1O15353 SCARNA2-201ENST00000458748 420 ntBASIC22.03■■□□□ 1.12
FOXN1O15353 AL356488.2-201ENST00000602755 427 ntBASIC22.03■■□□□ 1.12
FOXN1O15353 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.03■■□□□ 1.12
FOXN1O15353 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
FOXN1O15353 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN1O15353 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.03■■□□□ 1.12
FOXN1O15353 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN1O15353 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
FOXN1O15353 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.03■■□□□ 1.12
FOXN1O15353 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN1O15353 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN1O15353 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.03■■□□□ 1.12
FOXN1O15353 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN1O15353 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
FOXN1O15353 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXN1O15353 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.03■■□□□ 1.12
FOXN1O15353 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FOXN1O15353 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
FOXN1O15353 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FOXN1O15353 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FOXN1O15353 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FOXN1O15353 NUS1P2-201ENST00000417358 873 ntBASIC22.02■■□□□ 1.12
FOXN1O15353 MIR3687-2-201ENST00000577708 61 ntBASIC22.02■■□□□ 1.12
FOXN1O15353 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.02■■□□□ 1.12
FOXN1O15353 AL136038.4-201ENST00000603606 1261 ntBASIC22.02■■□□□ 1.12
FOXN1O15353 MIR3687-1-201ENST00000614492 61 ntBASIC22.02■■□□□ 1.12
FOXN1O15353 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
FOXN1O15353 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.02■■□□□ 1.12
FOXN1O15353 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FOXN1O15353 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.02■■□□□ 1.12
FOXN1O15353 BX323043.1-201ENST00000641006 1765 ntBASIC22.02■■□□□ 1.11
FOXN1O15353 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.02■■□□□ 1.11
FOXN1O15353 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
FOXN1O15353 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN1O15353 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.01■■□□□ 1.11
FOXN1O15353 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN1O15353 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN1O15353 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN1O15353 YBX2P1-201ENST00000394192 760 ntBASIC22.01■■□□□ 1.11
FOXN1O15353 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
FOXN1O15353 DNAJB3-202ENST00000449667 1266 ntBASIC22.01■■□□□ 1.11
FOXN1O15353 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.01■■□□□ 1.11
FOXN1O15353 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.01■■□□□ 1.11
FOXN1O15353 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.01■■□□□ 1.11
FOXN1O15353 AC090616.6-201ENST00000582640 721 ntBASIC22.01■■□□□ 1.11
FOXN1O15353 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC22.01■■□□□ 1.11
FOXN1O15353 AC027601.4-201ENST00000611259 610 ntBASIC22.01■■□□□ 1.11
FOXN1O15353 LINC01465-201ENST00000408887 1940 ntBASIC22.01■■□□□ 1.11
FOXN1O15353 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN1O15353 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN1O15353 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
FOXN1O15353 KRT18P28-201ENST00000453838 1332 ntBASIC22.01■■□□□ 1.11
FOXN1O15353 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
FOXN1O15353 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC22.01■■□□□ 1.11
FOXN1O15353 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
FOXN1O15353 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22■■□□□ 1.11
FOXN1O15353 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
FOXN1O15353 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22■■□□□ 1.11
FOXN1O15353 AC004408.2-201ENST00000623613 2777 ntBASIC22■■□□□ 1.11
FOXN1O15353 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
FOXN1O15353 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22■■□□□ 1.11
FOXN1O15353 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22■■□□□ 1.11
FOXN1O15353 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22■■□□□ 1.11
FOXN1O15353 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22■■□□□ 1.11
FOXN1O15353 RFPL4AP1-201ENST00000530883 850 ntBASIC22■■□□□ 1.11
FOXN1O15353 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22■■□□□ 1.11
FOXN1O15353 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22■■□□□ 1.11
FOXN1O15353 IGHV3-41-201ENST00000613121 348 ntBASIC22■■□□□ 1.11
FOXN1O15353 CCNC-219ENST00000627680 896 ntTSL 5 BASIC22■■□□□ 1.11
FOXN1O15353 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22■■□□□ 1.11
FOXN1O15353 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 TNXA-203ENST00000507684 2038 ntBASIC22■■□□□ 1.11
FOXN1O15353 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms