Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.07■□□□□ 0.48
EIF3FO00303 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.07■□□□□ 0.48
EIF3FO00303 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.07■□□□□ 0.48
EIF3FO00303 AC009947.2-201ENST00000444014 672 ntBASIC18.07■□□□□ 0.48
EIF3FO00303 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.07■□□□□ 0.48
EIF3FO00303 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.07■□□□□ 0.48
EIF3FO00303 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.07■□□□□ 0.48
EIF3FO00303 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
EIF3FO00303 AC073912.3-201ENST00000624414 853 ntBASIC18.07■□□□□ 0.48
EIF3FO00303 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.07■□□□□ 0.48
EIF3FO00303 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EIF3FO00303 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
EIF3FO00303 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.07■□□□□ 0.48
EIF3FO00303 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.06■□□□□ 0.48
EIF3FO00303 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
EIF3FO00303 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.06■□□□□ 0.48
EIF3FO00303 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
EIF3FO00303 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
EIF3FO00303 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.06■□□□□ 0.48
EIF3FO00303 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.06■□□□□ 0.48
EIF3FO00303 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.06■□□□□ 0.48
EIF3FO00303 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.06■□□□□ 0.48
EIF3FO00303 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.06■□□□□ 0.48
EIF3FO00303 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
EIF3FO00303 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
EIF3FO00303 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.06■□□□□ 0.48
EIF3FO00303 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.06■□□□□ 0.48
EIF3FO00303 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EIF3FO00303 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
EIF3FO00303 ABALON-201ENST00000629058 1903 ntBASIC18.06■□□□□ 0.48
EIF3FO00303 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.05■□□□□ 0.48
EIF3FO00303 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
EIF3FO00303 GMCL1P1-201ENST00000463439 1581 ntBASIC18.05■□□□□ 0.48
EIF3FO00303 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.05■□□□□ 0.48
EIF3FO00303 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
EIF3FO00303 SDHAP2-201ENST00000455183 2001 ntBASIC18.05■□□□□ 0.48
EIF3FO00303 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.05■□□□□ 0.48
EIF3FO00303 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.05■□□□□ 0.48
EIF3FO00303 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
EIF3FO00303 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.05■□□□□ 0.48
EIF3FO00303 SEC1P-202ENST00000473944 940 ntBASIC18.05■□□□□ 0.48
EIF3FO00303 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.05■□□□□ 0.48
EIF3FO00303 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.05■□□□□ 0.48
EIF3FO00303 AC010240.3-201ENST00000607688 395 ntBASIC18.05■□□□□ 0.48
EIF3FO00303 AC012306.2-201ENST00000609350 630 ntBASIC18.05■□□□□ 0.48
EIF3FO00303 AC097493.4-201ENST00000641197 219 ntBASIC18.05■□□□□ 0.48
EIF3FO00303 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.05■□□□□ 0.48
EIF3FO00303 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EIF3FO00303 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
EIF3FO00303 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
EIF3FO00303 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
EIF3FO00303 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.04■□□□□ 0.48
EIF3FO00303 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
EIF3FO00303 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EIF3FO00303 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms