Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 AC093525.10-201ENST00000625130 1569 ntBASIC18.13■□□□□ 0.49
VGLL3A8MV65 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 AC079328.2-201ENST00000561241 3354 ntBASIC18.12■□□□□ 0.49
VGLL3A8MV65 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 AC026691.1-201ENST00000602502 2017 ntBASIC18.12■□□□□ 0.49
VGLL3A8MV65 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 MIR638-201ENST00000385237 100 ntBASIC18.12■□□□□ 0.49
VGLL3A8MV65 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 AC106739.1-201ENST00000617035 715 ntBASIC18.12■□□□□ 0.49
VGLL3A8MV65 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.12■□□□□ 0.49
VGLL3A8MV65 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL3A8MV65 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.11■□□□□ 0.49
VGLL3A8MV65 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.11■□□□□ 0.49
VGLL3A8MV65 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.11■□□□□ 0.49
VGLL3A8MV65 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
VGLL3A8MV65 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VGLL3A8MV65 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 UNC93B3-201ENST00000308076 687 ntBASIC18.11■□□□□ 0.49
VGLL3A8MV65 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.11■□□□□ 0.49
VGLL3A8MV65 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 AL138724.1-201ENST00000606771 1088 ntBASIC18.11■□□□□ 0.49
VGLL3A8MV65 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.11■□□□□ 0.49
VGLL3A8MV65 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VGLL3A8MV65 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VGLL3A8MV65 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL3A8MV65 PKD1P5-201ENST00000532415 10291 ntBASIC18.1■□□□□ 0.49
VGLL3A8MV65 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL3A8MV65 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.1■□□□□ 0.49
VGLL3A8MV65 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.1■□□□□ 0.49
VGLL3A8MV65 USP31-203ENST00000567975 2142 ntTSL 2 BASIC18.1■□□□□ 0.49
VGLL3A8MV65 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL3A8MV65 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.1■□□□□ 0.49
VGLL3A8MV65 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC18.1■□□□□ 0.49
VGLL3A8MV65 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL3A8MV65 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL3A8MV65 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.1■□□□□ 0.49
VGLL3A8MV65 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.1■□□□□ 0.49
VGLL3A8MV65 SYT6-210ENST00000641643 1587 ntBASIC18.1■□□□□ 0.49
VGLL3A8MV65 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL3A8MV65 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL3A8MV65 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VGLL3A8MV65 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL3A8MV65 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.1■□□□□ 0.49
VGLL3A8MV65 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL3A8MV65 AC099791.2-201ENST00000605725 427 ntBASIC18.1■□□□□ 0.49
VGLL3A8MV65 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.1■□□□□ 0.49
VGLL3A8MV65 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms