Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00473A8K010 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00473A8K010 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC00473A8K010 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.06■□□□□ 0
LINC00473A8K010 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.06■□□□□ 0
LINC00473A8K010 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 AC099343.3-201ENST00000605834 2503 ntBASIC15.06■□□□□ 0
LINC00473A8K010 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LINC00473A8K010 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.06■□□□□ 0
LINC00473A8K010 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.06■□□□□ 0
LINC00473A8K010 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.06■□□□□ 0
LINC00473A8K010 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.06■□□□□ 0
LINC00473A8K010 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.06■□□□□ 0
LINC00473A8K010 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.06■□□□□ 0
LINC00473A8K010 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.06■□□□□ 0
LINC00473A8K010 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.06■□□□□ 0
LINC00473A8K010 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.06■□□□□ 0
LINC00473A8K010 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.06■□□□□ 0
LINC00473A8K010 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
LINC00473A8K010 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.06■□□□□ 0
LINC00473A8K010 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00473A8K010 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINC00473A8K010 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
LINC00473A8K010 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
LINC00473A8K010 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.05■□□□□ 0
LINC00473A8K010 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINC00473A8K010 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.05■□□□□ 0
LINC00473A8K010 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
LINC00473A8K010 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.05■□□□□ 0
LINC00473A8K010 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.05■□□□□ 0
LINC00473A8K010 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LINC00473A8K010 RPS2P55-201ENST00000397318 883 ntBASIC15.05■□□□□ -0
LINC00473A8K010 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.05■□□□□ -0
LINC00473A8K010 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 AC107956.1-201ENST00000494359 873 ntBASIC15.05■□□□□ -0
LINC00473A8K010 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 AC097488.1-201ENST00000507834 756 ntBASIC15.05■□□□□ -0
LINC00473A8K010 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
LINC00473A8K010 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
LINC00473A8K010 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.05■□□□□ -0
LINC00473A8K010 AC034236.2-201ENST00000606662 1610 ntBASIC15.05■□□□□ -0
LINC00473A8K010 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.05■□□□□ -0
LINC00473A8K010 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 AC138028.4-201ENST00000564984 1845 ntBASIC15.05■□□□□ -0
LINC00473A8K010 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.05■□□□□ -0
LINC00473A8K010 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00473A8K010 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.04■□□□□ -0
LINC00473A8K010 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.04■□□□□ -0
LINC00473A8K010 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.04■□□□□ -0
LINC00473A8K010 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LINC00473A8K010 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.04■□□□□ -0
LINC00473A8K010 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.04■□□□□ -0
LINC00473A8K010 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.04■□□□□ -0
LINC00473A8K010 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.04■□□□□ -0
LINC00473A8K010 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 KRT8P50-201ENST00000562022 1438 ntBASIC15.04■□□□□ -0
LINC00473A8K010 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LINC00473A8K010 ABHD17AP1-201ENST00000358206 933 ntBASIC15.04■□□□□ -0
LINC00473A8K010 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LINC00473A8K010 AP000593.1-201ENST00000393668 712 ntBASIC15.04■□□□□ -0
LINC00473A8K010 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.04■□□□□ -0
LINC00473A8K010 AL158047.1-201ENST00000445918 881 ntBASIC15.04■□□□□ -0
LINC00473A8K010 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.04■□□□□ -0
LINC00473A8K010 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.04■□□□□ -0
LINC00473A8K010 AC113410.3-201ENST00000623366 203 ntBASIC15.04■□□□□ -0
LINC00473A8K010 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.04■□□□□ -0
LINC00473A8K010 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms