Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL513190.1-201ENST00000621254 727 ntBASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 AL078644.1-201ENST00000609881 752 ntBASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 AC093512.1-201ENST00000617969 520 ntBASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM88BA6NKF7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 KRT18P27-201ENST00000427733 1299 ntBASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 MIR4745-201ENST00000577608 62 ntBASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 AP000867.4-201ENST00000641616 219 ntBASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM88BA6NKF7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.39■■□□□ 1.02
TMEM88BA6NKF7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
TMEM88BA6NKF7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.39■■□□□ 1.02
TMEM88BA6NKF7 AL357033.4-201ENST00000617703 1807 ntBASIC21.39■■□□□ 1.02
TMEM88BA6NKF7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 AC008687.5-201ENST00000593746 558 ntBASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 AF228730.6-201ENST00000641497 218 ntBASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 AC084121.3-201ENST00000641716 218 ntBASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 AC105233.6-201ENST00000642093 218 ntBASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM88BA6NKF7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 GK-202ENST00000378941 458 ntTSL 3 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM88BA6NKF7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms