Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 AL499627.1-201ENST00000569373 2188 ntBASIC16.74■□□□□ 0.27
TMEM129A0AVI4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 NIFKP9-201ENST00000419265 221 ntBASIC16.74■□□□□ 0.27
TMEM129A0AVI4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 KSR1P1-201ENST00000446298 240 ntBASIC16.74■□□□□ 0.27
TMEM129A0AVI4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 AC026471.5-201ENST00000615068 467 ntBASIC16.74■□□□□ 0.27
TMEM129A0AVI4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM129A0AVI4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.74■□□□□ 0.27
TMEM129A0AVI4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 AC138028.4-201ENST00000564984 1845 ntBASIC16.73■□□□□ 0.27
TMEM129A0AVI4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.73■□□□□ 0.27
TMEM129A0AVI4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.73■□□□□ 0.27
TMEM129A0AVI4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 AL355075.4-201ENST00000554988 638 ntBASIC16.73■□□□□ 0.27
TMEM129A0AVI4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM129A0AVI4 RCC2P6-201ENST00000526625 1557 ntBASIC16.72■□□□□ 0.27
TMEM129A0AVI4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 AC139713.2-201ENST00000641328 2723 ntBASIC16.72■□□□□ 0.27
TMEM129A0AVI4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 AC093677.2-201ENST00000600169 1863 ntBASIC16.72■□□□□ 0.27
TMEM129A0AVI4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 AP003071.4-201ENST00000562276 1284 ntBASIC16.72■□□□□ 0.27
TMEM129A0AVI4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 CR392000.1-201ENST00000624770 1228 ntBASIC16.72■□□□□ 0.27
TMEM129A0AVI4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM129A0AVI4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms