Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 KRT18P14-201ENST00000534205 1250 ntBASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 BID-214ENST00000617586 542 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV1-1A0A0B4J248 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 PCDHB19P-201ENST00000570871 2371 ntBASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms