Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC091390.4-202ENST00000476426 537 ntBASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRBV6-7A0A0A0MS04 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 KSR1P1-201ENST00000446298 240 ntBASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 RN7SL471P-201ENST00000580476 299 ntBASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-7A0A0A0MS04 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC106820.2-201ENST00000563775 3264 ntBASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 ESRRAP1-201ENST00000400596 1257 ntBASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC004951.3-201ENST00000418645 1148 ntBASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 AP002982.1-201ENST00000492365 877 ntBASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRBV6-7A0A0A0MS04 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms