Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 AC141257.4-201ENST00000634557 245 ntBASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 AC136944.6-201ENST00000634818 245 ntBASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB3Q9Y5E6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 TSPY21P-201ENST00000433481 731 ntBASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 YBX1P2-201ENST00000489612 999 ntBASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AL358472.4-201ENST00000633140 710 ntBASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AC018470.1-201ENST00000624790 3129 ntBASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB3Q9Y5E6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 AC140113.3-201ENST00000605663 199 ntBASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHB3Q9Y5E6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 NOC2LP2-201ENST00000407594 1944 ntBASIC18.1■□□□□ 0.49
PCDHB3Q9Y5E6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms