Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 AP000692.2-201ENST00000608391 879 ntBASIC21.75■■□□□ 1.07
SMC3Q9UQE7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 FSCN1P1-201ENST00000568912 1481 ntBASIC21.75■■□□□ 1.07
SMC3Q9UQE7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 AC008764.6-201ENST00000595909 2069 ntBASIC21.75■■□□□ 1.07
SMC3Q9UQE7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMC3Q9UQE7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 FAM197Y1-201ENST00000421178 764 ntBASIC21.74■■□□□ 1.07
SMC3Q9UQE7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 AL359736.2-201ENST00000621992 437 ntBASIC21.74■■□□□ 1.07
SMC3Q9UQE7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMC3Q9UQE7 ESPNP-201ENST00000270691 2015 ntBASIC21.73■■□□□ 1.07
SMC3Q9UQE7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.73■■□□□ 1.07
SMC3Q9UQE7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 KRT18P41-201ENST00000518924 1277 ntBASIC21.73■■□□□ 1.07
SMC3Q9UQE7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.73■■□□□ 1.07
SMC3Q9UQE7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMC3Q9UQE7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.72■■□□□ 1.07
SMC3Q9UQE7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms