Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 RPS2P4-201ENST00000476944 856 ntBASIC16.52■□□□□ 0.24
COPS3Q9UNS2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.52■□□□□ 0.24
COPS3Q9UNS2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COPS3Q9UNS2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COPS3Q9UNS2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.52■□□□□ 0.23
COPS3Q9UNS2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COPS3Q9UNS2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COPS3Q9UNS2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COPS3Q9UNS2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COPS3Q9UNS2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.52■□□□□ 0.23
COPS3Q9UNS2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COPS3Q9UNS2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COPS3Q9UNS2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 AC093677.2-201ENST00000600169 1863 ntBASIC16.51■□□□□ 0.23
COPS3Q9UNS2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 AC133681.1-201ENST00000465482 601 ntBASIC16.51■□□□□ 0.23
COPS3Q9UNS2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COPS3Q9UNS2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 RCC2P3-201ENST00000418112 1537 ntBASIC16.5■□□□□ 0.23
COPS3Q9UNS2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 AC110285.5-201ENST00000611501 352 ntBASIC16.5■□□□□ 0.23
COPS3Q9UNS2 MYC-208ENST00000641036 567 ntBASIC16.5■□□□□ 0.23
COPS3Q9UNS2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COPS3Q9UNS2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.49■□□□□ 0.23
COPS3Q9UNS2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COPS3Q9UNS2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.49■□□□□ 0.23
COPS3Q9UNS2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
COPS3Q9UNS2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.49■□□□□ 0.23
COPS3Q9UNS2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COPS3Q9UNS2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COPS3Q9UNS2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms