Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHA4Q9UN74 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHA4Q9UN74 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHA4Q9UN74 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHA4Q9UN74 SDHAP2-201ENST00000455183 2001 ntBASIC21.14■□□□□ 0.98
PCDHA4Q9UN74 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.14■□□□□ 0.98
PCDHA4Q9UN74 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
PCDHA4Q9UN74 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHA4Q9UN74 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 TSPY5P-201ENST00000426936 936 ntBASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 AC009065.1-201ENST00000564055 1225 ntBASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 AL157888.1-201ENST00000631930 593 ntBASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 AC099343.3-201ENST00000605834 2503 ntBASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHA4Q9UN74 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHA4Q9UN74 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 AC034232.1-201ENST00000506026 1064 ntBASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHA4Q9UN74 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 SPDYE15P-201ENST00000424157 909 ntBASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 RASA4DP-201ENST00000460726 1199 ntBASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms