Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ABCF3Q9NUQ8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.83■□□□□ 0.6
ABCF3Q9NUQ8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 AC134043.2-201ENST00000624206 2238 ntBASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 AC124067.4-201ENST00000519691 2379 ntBASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCF3Q9NUQ8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 KRT16P5-201ENST00000455284 522 ntBASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCF3Q9NUQ8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms