Protein–RNA interactions for Protein: Q9NQX0

PRDM6, Putative histone-lysine N-methyltransferase PRDM6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6Q9NQX0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRDM6Q9NQX0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 AC002310.6-201ENST00000624451 1377 ntBASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 SIGLEC30P-201ENST00000455569 941 ntBASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM6Q9NQX0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PRDM6Q9NQX0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PRDM6Q9NQX0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.08■□□□□ 0.65
PRDM6Q9NQX0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRDM6Q9NQX0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRDM6Q9NQX0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PRDM6Q9NQX0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 AC068472.1-201ENST00000474589 881 ntBASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 AC012676.1-201ENST00000574705 1949 ntBASIC19.08■□□□□ 0.64
PRDM6Q9NQX0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 LAGE3P1-201ENST00000425356 484 ntBASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 SLC25A6P5-201ENST00000435663 894 ntBASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 AC004449.1-201ENST00000564240 433 ntBASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 AL031432.2-201ENST00000566714 459 ntBASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 AL928711.1-201ENST00000570165 459 ntBASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 AL138831.2-201ENST00000606564 490 ntBASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.07■□□□□ 0.64
PRDM6Q9NQX0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM6Q9NQX0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM6Q9NQX0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRDM6Q9NQX0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PRDM6Q9NQX0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms