Protein–RNA interactions for Protein: Q9NQ75

CASS4, Cas scaffolding protein family member 4, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASS4Q9NQ75 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 ABALON-201ENST00000629058 1903 ntBASIC18.8■□□□□ 0.6
CASS4Q9NQ75 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 TSPY7P-201ENST00000431358 1114 ntBASIC18.8■□□□□ 0.6
CASS4Q9NQ75 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 LINC01023-201ENST00000606054 436 ntBASIC18.8■□□□□ 0.6
CASS4Q9NQ75 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CASS4Q9NQ75 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 AL023803.3-201ENST00000615559 522 ntBASIC18.79■□□□□ 0.6
CASS4Q9NQ75 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASS4Q9NQ75 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 UNC93B2-201ENST00000285383 730 ntBASIC18.78■□□□□ 0.6
CASS4Q9NQ75 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASS4Q9NQ75 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 NOC2LP1-202ENST00000452600 2235 ntBASIC18.77■□□□□ 0.6
CASS4Q9NQ75 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASS4Q9NQ75 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms