Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 BX276092.2-201ENST00000417668 665 ntBASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 AC099398.1-201ENST00000567919 2776 ntBASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SND1-IT1Q9HBX3 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SND1-IT1Q9HBX3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC12.4□□□□□ -0.43
SND1-IT1Q9HBX3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SND1-IT1Q9HBX3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SND1-IT1Q9HBX3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
SND1-IT1Q9HBX3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SND1-IT1Q9HBX3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms