Protein–RNA interactions for Protein: Q9BZW5

TM6SF1, Transmembrane 6 superfamily member 1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1Q9BZW5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 AL133373.2-201ENST00000623187 2828 ntBASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 TSPY15P-201ENST00000457163 923 ntBASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 MIR3180-4-201ENST00000582223 153 ntBASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 AC138028.4-201ENST00000564984 1845 ntBASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TM6SF1Q9BZW5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 AC104390.1-201ENST00000555663 520 ntBASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 PHGDH-209ENST00000641074 1780 ntBASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TM6SF1Q9BZW5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TM6SF1Q9BZW5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 INGX-201ENST00000359239 846 ntBASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 CYP2D8P-201ENST00000433633 1490 ntBASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 AC018470.1-201ENST00000624790 3129 ntBASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM6SF1Q9BZW5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 KRT8P9-201ENST00000558927 1449 ntBASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 AC010947.1-201ENST00000623454 693 ntBASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM6SF1Q9BZW5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms