Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 MCRIP2P1-201ENST00000394346 511 ntBASIC5□□□□□ -1.61
LCE3DQ9BYE3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AL356441.2-201ENST00000443009 864 ntBASIC5□□□□□ -1.61
LCE3DQ9BYE3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 GRAMD4P4-201ENST00000613563 1115 ntBASIC5□□□□□ -1.61
LCE3DQ9BYE3 AL035685.1-201ENST00000636663 812 ntBASIC5□□□□□ -1.61
LCE3DQ9BYE3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AC104417.2-201ENST00000562989 1793 ntBASIC5□□□□□ -1.61
LCE3DQ9BYE3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AC124067.4-201ENST00000519691 2379 ntBASIC5□□□□□ -1.61
LCE3DQ9BYE3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC5□□□□□ -1.61
LCE3DQ9BYE3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC5□□□□□ -1.61
LCE3DQ9BYE3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 SDHAP1-207ENST00000440850 2000 ntBASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms