Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.38■□□□□ 0.69
SMOQ99835 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
SMOQ99835 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SMOQ99835 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.38■□□□□ 0.69
SMOQ99835 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.38■□□□□ 0.69
SMOQ99835 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.38■□□□□ 0.69
SMOQ99835 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMOQ99835 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.37■□□□□ 0.69
SMOQ99835 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMOQ99835 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SMOQ99835 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.37■□□□□ 0.69
SMOQ99835 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.37■□□□□ 0.69
SMOQ99835 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.37■□□□□ 0.69
SMOQ99835 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.37■□□□□ 0.69
SMOQ99835 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMOQ99835 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.37■□□□□ 0.69
SMOQ99835 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.37■□□□□ 0.69
SMOQ99835 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.37■□□□□ 0.69
SMOQ99835 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.37■□□□□ 0.69
SMOQ99835 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.37■□□□□ 0.69
SMOQ99835 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.37■□□□□ 0.69
SMOQ99835 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.37■□□□□ 0.69
SMOQ99835 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SMOQ99835 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMOQ99835 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.37■□□□□ 0.69
SMOQ99835 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SMOQ99835 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMOQ99835 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMOQ99835 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SMOQ99835 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.36■□□□□ 0.69
SMOQ99835 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMOQ99835 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SMOQ99835 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMOQ99835 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMOQ99835 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMOQ99835 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.36■□□□□ 0.69
SMOQ99835 RNF126P1-202ENST00000569893 925 ntBASIC19.36■□□□□ 0.69
SMOQ99835 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.36■□□□□ 0.69
SMOQ99835 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMOQ99835 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.36■□□□□ 0.69
SMOQ99835 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMOQ99835 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMOQ99835 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMOQ99835 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMOQ99835 AC004408.2-201ENST00000623613 2777 ntBASIC19.36■□□□□ 0.69
SMOQ99835 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMOQ99835 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMOQ99835 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.35■□□□□ 0.69
SMOQ99835 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SMOQ99835 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.35■□□□□ 0.69
SMOQ99835 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.35■□□□□ 0.69
SMOQ99835 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.35■□□□□ 0.69
SMOQ99835 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.35■□□□□ 0.69
SMOQ99835 UPK3BP1-201ENST00000428678 509 ntBASIC19.35■□□□□ 0.69
SMOQ99835 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.35■□□□□ 0.69
SMOQ99835 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SMOQ99835 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.35■□□□□ 0.69
SMOQ99835 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.35■□□□□ 0.69
SMOQ99835 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.35■□□□□ 0.69
SMOQ99835 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMOQ99835 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMOQ99835 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms