Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCNX1Q96RV3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.3■□□□□ 0.2
PCNX1Q96RV3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.29■□□□□ 0.2
PCNX1Q96RV3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 MTMR9LP-203ENST00000426597 1545 ntBASIC16.29■□□□□ 0.2
PCNX1Q96RV3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 AC018712.1-201ENST00000455767 687 ntBASIC16.29■□□□□ 0.2
PCNX1Q96RV3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCNX1Q96RV3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 TREX1-205ENST00000625293 1783 ntBASIC16.28■□□□□ 0.2
PCNX1Q96RV3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 KRT18P13-201ENST00000400056 1290 ntBASIC16.28■□□□□ 0.2
PCNX1Q96RV3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 RCC2P3-201ENST00000418112 1537 ntBASIC16.28■□□□□ 0.2
PCNX1Q96RV3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 CLDN5-201ENST00000403084 2357 ntBASIC16.28■□□□□ 0.2
PCNX1Q96RV3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 AP003733.1-201ENST00000491725 852 ntBASIC16.28■□□□□ 0.2
PCNX1Q96RV3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 AL355385.1-201ENST00000606123 409 ntBASIC16.28■□□□□ 0.2
PCNX1Q96RV3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCNX1Q96RV3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 GUSBP12-201ENST00000513727 720 ntBASIC16.27■□□□□ 0.2
PCNX1Q96RV3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 AC145285.3-201ENST00000564603 959 ntBASIC16.27■□□□□ 0.2
PCNX1Q96RV3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PCNX1Q96RV3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.27■□□□□ 0.19
PCNX1Q96RV3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCNX1Q96RV3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCNX1Q96RV3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.27■□□□□ 0.19
PCNX1Q96RV3 FP475955.4-201ENST00000623131 1990 ntBASIC16.27■□□□□ 0.19
PCNX1Q96RV3 AL357033.4-201ENST00000617703 1807 ntBASIC16.27■□□□□ 0.19
PCNX1Q96RV3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PCNX1Q96RV3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.27■□□□□ 0.19
PCNX1Q96RV3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.27■□□□□ 0.19
PCNX1Q96RV3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms