Protein–RNA interactions for Protein: Q96NJ6

ZFP3, Zinc finger protein 3 homolog, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP3Q96NJ6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 AL445228.2-201ENST00000605589 952 ntBASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 AL133373.2-201ENST00000623187 2828 ntBASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 TSPY21P-201ENST00000433481 731 ntBASIC17■□□□□ 0.31
ZFP3Q96NJ6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 KRT18P35-201ENST00000510488 1269 ntBASIC17■□□□□ 0.31
ZFP3Q96NJ6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZFP3Q96NJ6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17■□□□□ 0.31
ZFP3Q96NJ6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 ZNF815P-204ENST00000434898 1737 ntBASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 INGX-201ENST00000359239 846 ntBASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 AL031432.5-201ENST00000641059 760 ntBASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZFP3Q96NJ6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms