Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 AC092666.2-201ENST00000613287 246 ntBASIC17.82■□□□□ 0.44
VPS33AQ96AX1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 ESPNP-201ENST00000270691 2015 ntBASIC17.82■□□□□ 0.44
VPS33AQ96AX1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 KRASP1-201ENST00000407852 552 ntBASIC17.81■□□□□ 0.44
VPS33AQ96AX1 KRT17P3-201ENST00000420566 1262 ntBASIC17.81■□□□□ 0.44
VPS33AQ96AX1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 PKD1P1-201ENST00000458669 6805 ntBASIC17.81■□□□□ 0.44
VPS33AQ96AX1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 KRT8P3-201ENST00000519669 1449 ntBASIC17.81■□□□□ 0.44
VPS33AQ96AX1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS33AQ96AX1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 AC093677.2-201ENST00000600169 1863 ntBASIC17.8■□□□□ 0.44
VPS33AQ96AX1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS33AQ96AX1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 KRT16P5-201ENST00000455284 522 ntBASIC17.79■□□□□ 0.44
VPS33AQ96AX1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 MYC-208ENST00000641036 567 ntBASIC17.79■□□□□ 0.44
VPS33AQ96AX1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS33AQ96AX1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms