Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2E3Q969T4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 KRT18P23-201ENST00000435622 1283 ntBASIC17.8■□□□□ 0.44
UBE2E3Q969T4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2E3Q969T4 KRT8P50-201ENST00000562022 1438 ntBASIC17.8■□□□□ 0.44
UBE2E3Q969T4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.79■□□□□ 0.44
UBE2E3Q969T4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 HMGA1P5-201ENST00000412453 271 ntBASIC17.79■□□□□ 0.44
UBE2E3Q969T4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 KRT8P9-201ENST00000558927 1449 ntBASIC17.79■□□□□ 0.44
UBE2E3Q969T4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2E3Q969T4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 AC104581.1-202ENST00000635932 2618 ntBASIC17.78■□□□□ 0.44
UBE2E3Q969T4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.78■□□□□ 0.44
UBE2E3Q969T4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.78■□□□□ 0.44
UBE2E3Q969T4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.77■□□□□ 0.44
UBE2E3Q969T4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBE2E3Q969T4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBE2E3Q969T4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBE2E3Q969T4 KRT18P22-201ENST00000402024 1347 ntBASIC17.77■□□□□ 0.44
UBE2E3Q969T4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms