Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC069236.1-201ENST00000604339 616 ntBASIC16.32■□□□□ 0.2
AP3S1Q92572 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3S1Q92572 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
AP3S1Q92572 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
AP3S1Q92572 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.32■□□□□ 0.2
AP3S1Q92572 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.32■□□□□ 0.2
AP3S1Q92572 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.31■□□□□ 0.2
AP3S1Q92572 AL023806.1-201ENST00000603994 1649 ntBASIC16.31■□□□□ 0.2
AP3S1Q92572 MTMR9LP-203ENST00000426597 1545 ntBASIC16.31■□□□□ 0.2
AP3S1Q92572 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.31■□□□□ 0.2
AP3S1Q92572 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
AP3S1Q92572 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.31■□□□□ 0.2
AP3S1Q92572 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
AP3S1Q92572 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.31■□□□□ 0.2
AP3S1Q92572 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.31■□□□□ 0.2
AP3S1Q92572 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.31■□□□□ 0.2
AP3S1Q92572 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.31■□□□□ 0.2
AP3S1Q92572 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
AP3S1Q92572 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP3S1Q92572 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP3S1Q92572 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3S1Q92572 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
AP3S1Q92572 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.31■□□□□ 0.2
AP3S1Q92572 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP3S1Q92572 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
AP3S1Q92572 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3S1Q92572 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.3■□□□□ 0.2
AP3S1Q92572 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3S1Q92572 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3S1Q92572 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AP3S1Q92572 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3S1Q92572 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
AP3S1Q92572 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
AP3S1Q92572 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.3■□□□□ 0.2
AP3S1Q92572 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.3■□□□□ 0.2
AP3S1Q92572 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
AP3S1Q92572 AC008694.1-202ENST00000636953 945 ntBASIC16.3■□□□□ 0.2
AP3S1Q92572 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3S1Q92572 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
AP3S1Q92572 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
AP3S1Q92572 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
AP3S1Q92572 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3S1Q92572 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AP3S1Q92572 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S1Q92572 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.29■□□□□ 0.2
AP3S1Q92572 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3S1Q92572 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.29■□□□□ 0.2
AP3S1Q92572 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.29■□□□□ 0.2
AP3S1Q92572 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3S1Q92572 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP3S1Q92572 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP3S1Q92572 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
AP3S1Q92572 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3S1Q92572 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 AC073210.2-201ENST00000430369 194 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms