Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 HOXB1-202ENST00000577092 1414 ntBASIC19.43■□□□□ 0.7
RNF139Q8WU17 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 AL359075.1-203ENST00000462729 1002 ntBASIC19.43■□□□□ 0.7
RNF139Q8WU17 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.43■□□□□ 0.7
RNF139Q8WU17 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF139Q8WU17 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 ANO7L1-203ENST00000602586 1720 ntBASIC19.42■□□□□ 0.7
RNF139Q8WU17 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 FAM8A6P-201ENST00000407496 1135 ntBASIC19.42■□□□□ 0.7
RNF139Q8WU17 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF139Q8WU17 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF139Q8WU17 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF139Q8WU17 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF139Q8WU17 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF139Q8WU17 ARMC10P1-201ENST00000313754 855 ntBASIC19.41■□□□□ 0.7
RNF139Q8WU17 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF139Q8WU17 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 SEC1P-202ENST00000473944 940 ntBASIC19.41■□□□□ 0.7
RNF139Q8WU17 KRT18P35-201ENST00000510488 1269 ntBASIC19.41■□□□□ 0.7
RNF139Q8WU17 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 AL445228.2-201ENST00000605589 952 ntBASIC19.41■□□□□ 0.7
RNF139Q8WU17 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF139Q8WU17 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF139Q8WU17 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF139Q8WU17 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RNF139Q8WU17 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RNF139Q8WU17 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF139Q8WU17 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 AC087388.1-201ENST00000571370 1112 ntBASIC19.4■□□□□ 0.7
RNF139Q8WU17 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF139Q8WU17 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF139Q8WU17 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms