Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMIM11BQ8TCY0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SMIM11BQ8TCY0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 KRT19P1-201ENST00000405746 1186 ntBASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 AC007322.4-201ENST00000509611 723 ntBASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 CYP2T3P-201ENST00000601990 817 ntBASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 AL118508.1-201ENST00000613502 2345 ntBASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM11BQ8TCY0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 AC013268.1-206ENST00000638368 961 ntBASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 AC112229.1-201ENST00000639295 961 ntBASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM11BQ8TCY0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms