Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 SLC25A3P1-201ENST00000443844 931 ntBASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 MCCD1P1-208ENST00000445732 328 ntBASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCLL1Q8TB92 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 AC113347.1-201ENST00000413321 391 ntBASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 MIR3180-5-201ENST00000583743 153 ntBASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 AC005363.2-201ENST00000618631 242 ntBASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLL1Q8TB92 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.14■□□□□ 0.5
HMGCLL1Q8TB92 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
HMGCLL1Q8TB92 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
HMGCLL1Q8TB92 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 ECEL1P3-201ENST00000427961 737 ntBASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 CR769767.2-201ENST00000622735 460 ntBASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLL1Q8TB92 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms