Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 MIR940-201ENST00000401276 94 ntBASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 MIR5100-201ENST00000579544 119 ntBASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 BNIP3P18-201ENST00000593976 575 ntBASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 KRT89P-201ENST00000620027 1478 ntBASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 AL353692.3-201ENST00000407031 1396 ntBASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 AC073648.2-201ENST00000510116 352 ntBASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 AL355385.1-201ENST00000606123 409 ntBASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 AC114341.1-201ENST00000618070 349 ntBASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 RCC2P3-201ENST00000418112 1537 ntBASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNIP1Q8TAD8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 FAM215A-202ENST00000632077 792 ntBASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNIP1Q8TAD8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
SNIP1Q8TAD8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 AC008556.1-201ENST00000610908 2040 ntBASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.39■□□□□ 0.37
SNIP1Q8TAD8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms