Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 HLA-A-201ENST00000376802 1334 ntBASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 IGHV3-41-201ENST00000613121 348 ntBASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC25.58■■□□□ 1.69
ARHGEF28Q8N1W1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
ARHGEF28Q8N1W1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
ARHGEF28Q8N1W1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
ARHGEF28Q8N1W1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC25.58■■□□□ 1.68
ARHGEF28Q8N1W1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 AC023511.2-201ENST00000618803 211 ntBASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ARHGEF28Q8N1W1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
ARHGEF28Q8N1W1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ARHGEF28Q8N1W1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ARHGEF28Q8N1W1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ARHGEF28Q8N1W1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC25.55■■□□□ 1.68
ARHGEF28Q8N1W1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ARHGEF28Q8N1W1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC25.55■■□□□ 1.68
ARHGEF28Q8N1W1 AC008608.2-201ENST00000606089 416 ntBASIC25.55■■□□□ 1.68
ARHGEF28Q8N1W1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
ARHGEF28Q8N1W1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ARHGEF28Q8N1W1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ARHGEF28Q8N1W1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 AC018712.1-201ENST00000455767 687 ntBASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 AC114341.1-201ENST00000618070 349 ntBASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARHGEF28Q8N1W1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 AC011840.4-201ENST00000578471 627 ntBASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC25.53■■□□□ 1.68
ARHGEF28Q8N1W1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms