Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 AC142086.2-201ENST00000569753 217 ntBASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 AL353708.3-201ENST00000610272 989 ntBASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 RCC2P3-201ENST00000418112 1537 ntBASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 SIRPAP1-201ENST00000448467 1770 ntBASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01561Q8N1V8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 AC026271.3-201ENST00000571884 352 ntBASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 PRORSD1P-202ENST00000563365 2154 ntBASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
LINC01561Q8N1V8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC01561Q8N1V8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms